{"id":18,"date":"2012-02-17T16:29:32","date_gmt":"2012-02-17T20:29:32","guid":{"rendered":"http:\/\/blogs.vassar.edu\/joschwarz\/?page_id=18"},"modified":"2025-05-30T02:44:30","modified_gmt":"2025-05-30T06:44:30","slug":"publications","status":"publish","type":"page","link":"https:\/\/pages.vassar.edu\/joschwarz\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"

Schwarz, J.A, Pacio, T., J.G. Perill\u00e1n. Changing Climates with STEAM: Complex Problems, Creativity, and Collaboration. <\/strong>2025. In: International Handbook of Research on STEAM Curriculum and Practice. Eds. Farenga, Garofalo, Ness. Routledge. ISBN 9781032564265<\/p>\n

Schwarz, J.A.  Climate Change, Human Displacement, and STEM Education: toward a more transdisciplinary and inclusive culture of science.<\/strong>  2023.  In: Forced Migration and Higher Education: Now What? Eds Brill-Carlat, Murray, H\u00f6hn. Palgrave-Macmillan.  https:\/\/link.springer.com\/chapter\/10.1007\/978-3-031-12350-4_18<\/a><\/p>\n

Poole AZ, Mitchell G, Roark AM, Schwarz J.  2022.  SEAS CURE: Exploring Coral Biology Across Scales.<\/strong>  CourseSource 9. https:\/\/doi.org\/10.24918\/cs.2022.38<\/a><\/p>\n

Schwarz, J., Bjork, C. Cameron, J., Hunter A-B, Pacio, T. Perillan, J. 2021. Grand Challenges: Building interdisciplinary communities to tackle complex global issues. <\/strong>Federation of American Associations for Experimental Biology Journal: Biochemistry and Molecular Biology. https:\/\/doi.org\/10.1096\/fasebj.2021.35.S1.05078<\/a> <\/p>\n

Livingston, N., Bernatskiy, A., Livingston, K., Smith, M., Schwarz, J.,  Bongard, J., Wallach, D., and J. Long. 2017. Modularity and Sparsity: Evolution of Neural Net Controllers in Physically Embodied Robots.<\/strong> Frontiers in Robotics and AI. https:\/\/doi.org\/10.3389\/frobt.2016.00075<\/p>\n

Larson, A., Cappelle, C., Livingston, K., Livingston, N., Long, J., Schwarz, J., Smith, M., and J. Bongard. 2016. Recombination Hotspots Promote the Evolvability of Modular Systems. <\/strong> Proc. 2016  Genetic and Evolutionary Computation Conference Companion.<\/p>\n

Lehnert, E.M., Mouchka, M.E., Burriesci, M.S., Gallo, N.D., Schwarz, J.A., and Pringle, J.R. 2014. Extensive Differences in Gene Expression between Symbiotic and Aposymbiotic Cnidarians.<\/strong> G3 Genes, Genomes, Genetics 4(2): 277\u2013295.<\/p>\n

Garrett, T.E., Schmeitzel, J., Klein, J., Hwang, J., and Schwarz, J. 2013. Comparative lipid profiling of the cnidarian Aiptasia pallida<\/em> and its dinoflagellate symbiont. <\/strong> PLOS One. 8(3): e57975. doi:10.1371\/journal.pone.0057975. pdf<\/a><\/p>\n

Singer, S.R., Schwarz, J.A., et al. 2013. Keeping an Eye on Biology<\/strong>. Science. 339: 408-409.  <\/cite>pdf<\/a><\/p>\n

Schwarz, J.A., Mitchelmore, C.L, Jones, R., O\u2019Dea, A., Seymour, S. 2013. Exposure to copper induces oxidative and stress responses and DNA damage in the coral Montastraea franksi<\/i>.<\/strong> Comparative Biochemistry and Physiology C 157: 272\u2013279. Link to article<\/a><\/p>\n

Banta, L.M., Crespi, E.J., Nehm, R.H.,  Singer, S., Schwarz, J.A., Manduca, C.A. and participants.  2012. Genomics and Bioinformatics Across the Curriculum: Inquiry-based modules for introductory to upper level biology courses. <\/strong>CBE-Life Sciences Education 11:203-208. pdf<\/a><\/p>\n

Baumler, D.J., Banta, L.M., Hung, K.F., Schwarz, J.A., Cabot, E. L., Glasner, J.D., Perna, N.T. 2012. Using comparative genomics for inquiry-based learning to dissect virulence of Escherichia coli<\/em> O157:H7 and <\/strong>Yersinia pestis<\/strong>.  <\/em>CBE-Life Sciences Education 11:81-93. pdf<\/a><\/p>\n

Sunagawa, S., Wilson, E., Thaler, M., Smith, M., Medina, M., Weis, V., Pringle, J., Schwarz, J. 2009. Generation and analysis of transcriptomic resources for a model-system on the rise: the sea anemone Aiptasia pallida<\/em> and its dinoflagellate endosymbiont<\/strong>. BMC Genomics 10:258. pdf<\/a>.<\/p>\n

Voolstra. C., Schwarz, J., Schnetzer, J., Sunagawa, S. DeSalvo, M., Szmant, A., Coffroth, M.A., Medina, M. 2009. The host transcriptome remains unaltered during establishment of coral-algal symbioses<\/strong>. Molecular Ecology 18(9):1823-33. pdf<\/a><\/p>\n

Schwarz, J.A. 2008. Understanding the intracellular niche in cnidarian-Symbiodinium<\/em> symbioses: parasites lead the way.<\/strong> Vie et Millieu: Life and the Environment. 58 (2): 141-151. pdf<\/a><\/p>\n

Ronsheim, M., Pregnall, A.M., Schwarz, J. , Schlessman, M., Susman, K. 2009. Teaching Outside the Can: a new approach to Introductory Biology<\/strong>. Bioscene 35:12. pdf<\/a><\/p>\n

Voolstra, C., Sunagawa, S., Schwarz, J.A., Coffroth, M.A., Yellowlees, D., Leggat, W., Medina, M. 2008. Evolutionary analysis of orthologous cDNA sequences from cultured and symbiotic dinoflagellate symbionts of reef-building corals (Dinophyceae: Symbiodinium)<\/strong>. Comp Biochem Physiol D Genomics and Proteomics. pdf<\/a><\/p>\n

DeSalvo, M.,Voolstra, C., Sunagawa, S., Schwarz, JA.., Coffroth, M.A., Szmant, A., Stillman, J.H., Medina, M. 2008.Differential gene expression during thermal stress and bleaching in the Caribbean coral Montastraea faveolata<\/em><\/strong>. Molecular Ecology 17: 3952-3971. pdf<\/a><\/p>\n

Schwarz, J.A., Brokstein, P.B., Voolstra, C., Terry, A.Y., Szmant A., Coffroth, M.A., Miller, D.J., and Medina, M. 2008.Coral Life History and Symbiosis: functional genomic resources for two reef building Caribbean corals, Acropora palmata<\/em> and Montastraea faveolata<\/em><\/strong>. BMC Genomics 9:97. pdf<\/a><\/p>\n

Schwarz, J.A., Brokstein, P., Manohar, C., Szmant, A., Coffroth, M.A., and M. Medina. 2006. Coral Reef Genomics: Developing tools for functional genomics of coral symbiosis<\/strong>. Proc 10th ICRS<\/p>\n

Schwarz, J.A., Fouts, A.E., Cummings, C., Ferguson, D. and J.C. Boothroyd. 2005. A novel rhoptry protein in Toxoplasma gondii bradyzoites and merozoites<\/strong>. Molecular and Biochemical Parasitology 44:159-66.<\/p>\n

Schwarz, J.A. and V.M. Weis. 2003. Localization of a symbiosis-related protein, sym32, in the Anthopleura elegantissima-Symbiodinium muscatinei<\/em> association<\/strong>. Biological Bulletin 205: 339-350.<\/p>\n

Schwarz, J.A., V.M. Weis, and D. Potts. 2002. Feeding behavior and acquisition of symbiotic dinoflagellates by larvae of the sea anemone Anthopleura elegantissima<\/em><\/strong>. Marine Biology 140: 471-478.<\/p>\n

Mitchelmore, C.L., J.A. Schwarz, and V.M. Weis. 2002. Development of symbiosis-specific genes as biomarkers for the early detection of cnidarian-algal symbiosis breakdown<\/strong>. Marine Environmental Research 54: 345-349.<\/p>\n

Weis, V.M., Verde, E.A., Pribyl, A., and J.A. Schwarz. 2002. Aspects of the larval biology of the sea anemonesAnthopleura elegantissima<\/em> and A. artemesia<\/em><\/strong>. Invertebrate Biology 121(3):190-201.<\/p>\n

Reynolds, W.S., J.A. Schwarz, and V.M. Weis. 2000. Symbosis-enhanced gene expression in cnidarian-algal associations: cloning and characterization of a cDNA, sym 32, encoding a possible cell adhesion protein<\/strong>. Comparative and Biochemical Physiology, A:126. 33-39.<\/p>\n

Schwarz, J.A., D.A. Krupp, and V.M. Weis. 1999. Late larval development and onset of symbiosis in the scleractinian coral Fungia scutaria<\/em><\/strong>. Biological Bulletin 196: 70-79.<\/p>\n","protected":false},"excerpt":{"rendered":"

Schwarz, J.A, Pacio, T., J.G. Perill\u00e1n. Changing Climates with STEAM: Complex Problems, Creativity, and Collaboration. 2025. In: International Handbook of Research on STEAM Curriculum and Practice. Eds. Farenga, Garofalo, Ness. Routledge. ISBN 9781032564265 Schwarz, J.A.  Climate Change, Human Displacement, and STEM Education: toward a more transdisciplinary and inclusive culture of science.  2023.  In: Forced Migration and … Continue reading Publications<\/span> →<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"ngg_post_thumbnail":0,"footnotes":""},"class_list":["post-18","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/pages.vassar.edu\/joschwarz\/wp-json\/wp\/v2\/pages\/18","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/pages.vassar.edu\/joschwarz\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/pages.vassar.edu\/joschwarz\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/pages.vassar.edu\/joschwarz\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/pages.vassar.edu\/joschwarz\/wp-json\/wp\/v2\/comments?post=18"}],"version-history":[{"count":31,"href":"https:\/\/pages.vassar.edu\/joschwarz\/wp-json\/wp\/v2\/pages\/18\/revisions"}],"predecessor-version":[{"id":1033,"href":"https:\/\/pages.vassar.edu\/joschwarz\/wp-json\/wp\/v2\/pages\/18\/revisions\/1033"}],"wp:attachment":[{"href":"https:\/\/pages.vassar.edu\/joschwarz\/wp-json\/wp\/v2\/media?parent=18"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}